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Configure error while installing musrfit ('C compiler cannot create executables')


I'm trying to install 'musrfit' on cygwin following these (http://lmu.web.psi.ch/musrfit/user/MUSR/MusrFitSetup.html#A_4_MS_Windows)
instructions. When it comes to

./configure --prefix=$ROOTSYS

however, I get following error message:

configure:3985: error: C compiler cannot create executables
See `config.log' for more details

Config.log:

This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by musrfit configure 0.11.0, which was
generated by GNU Autoconf 2.69.  Invocation command line was

  $ ./configure

## --------- ##
## Platform. ##
## --------- ##

hostname = Philman-PC
uname -m = x86_64
uname -r = 1.7.31(0.272/5/3)
uname -s = CYGWIN_NT-6.1
uname -v = 2014-07-25 11:26

/usr/bin/uname -p = unknown
/bin/uname -X     = unknown

/bin/arch              = x86_64
/usr/bin/arch -k       = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo      = unknown
/bin/machine           = unknown
/usr/bin/oslevel       = unknown
/bin/universe          = unknown

PATH: /cygdrive/c/root
/bin
PATH: /usr/lib/qt4
/bin
PATH: /usr/i686-pc-cygwin/bin
PATH: /usr/local/bin
PATH: /usr/bin
PATH: /cygdrive/c/Windows/system32
PATH: /cygdrive/c/Windows
PATH: /cygdrive/c/Windows/System32/Wbem
PATH: /cygdrive/c/Windows/System32/WindowsPowerShell/v1.0
PATH: /cygdrive/c/Program Files (x86)/ATI Technologies/ATI.ACE/Core-Static
PATH: /cygdrive/c/Program Files (x86)/MiKTeX 2.9/miktex/bin
PATH: /usr/lib/lapack


## ----------- ##
## Core tests. ##
## ----------- ##

configure:2559: checking build system type
configure:2573: result: x86_64-unknown-cygwin
configure:2593: checking host system type
configure:2606: result: x86_64-unknown-cygwin
configure:2826: checking for a BSD-compatible install
configure:2894: result: /usr/bin/install -c
configure:2905: checking whether build environment is sane
configure:2960: result: yes
configure:3111: checking for a thread-safe mkdir -p
configure:3150: result: /usr/bin/mkdir -p
configure:3157: checking for gawk
configure:3173: found /usr/bin/gawk
configure:3184: result: gawk
configure:3195: checking whether make sets $(MAKE)
configure:3217: result: yes
configure:3246: checking whether make supports nested variables
configure:3263: result: yes
configure:3398: checking whether ln -s works
configure:3402: result: yes
configure:3459: checking how to print strings
configure:3486: result: printf
configure:3519: checking for style of include used by make
configure:3547: result: GNU
configure:3618: checking for gcc
configure:3634: found /usr/bin/gcc
configure:3645: result: gcc
configure:3874: checking for C compiler version
configure:3883: gcc --version >&5
gcc (GCC) 4.8.3
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.  There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

configure:3894: $? = 0
configure:3883: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-cygwin/4.8.3/lto-wrapper.exe
Target: x86_64-pc-cygwin
Configured with: /cygdrive/i/szsz/tmpp/cygwin64/gcc/gcc-4.8.3-2/src/gcc-4.8.3/configure --srcdir=/cygdrive/i/szsz/tmpp/cygwin64/gcc/gcc-4.8.3-2/src/gcc-4.8.3 --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --libexecdir=/usr/libexec --datadir=/usr/share --localstatedir=/var --sysconfdir=/etc --libdir=/usr/lib --datarootdir=/usr/share --docdir=/usr/share/doc/gcc --htmldir=/usr/share/doc/gcc/html -C --build=x86_64-pc-cygwin --host=x86_64-pc-cygwin --target=x86_64-pc-cygwin --without-libiconv-prefix --without-libintl-prefix --enable-shared --enable-shared-libgcc --enable-static --enable-version-specific-runtime-libs --enable-bootstrap --disable-__cxa_atexit --with-dwarf2 --with-tune=generic --enable-languages=ada,c,c++,fortran,lto,objc,obj-c++ --enable-graphite --enable-threads=posix --enable-libatomic --enable-libgomp --disable-libitm --enable-libquadmath --enable-libquadmath-support --enable-libssp --enable-libada --enable-libgcj-sublibs --disable-java-awt --disable-symvers --with-ecj-jar=/usr/share/java/ecj.jar --with-gnu-ld --with-gnu-as --with-cloog-include=/usr/include/cloog-isl --without-libiconv-prefix --without-libintl-prefix --with-system-zlib --libexecdir=/usr/lib
Thread model: posix
gcc version 4.8.3 (GCC)
configure:3894: $? = 0
configure:3883: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:3894: $? = 1
configure:3883: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:3894: $? = 1
configure:3914: checking whether the C compiler works
configure:3936: gcc    conftest.c  >&5
/tmp/ccx4LEUS.s: Assembler messages:
/tmp/ccx4LEUS.s:8: Error: bad register name `%rbp'
/tmp/ccx4LEUS.s:9: Warning: .seh_pushreg ignored for this target
/tmp/ccx4LEUS.s:10: Error: bad register name `%rsp'
/tmp/ccx4LEUS.s:11: Warning: .seh_setframe ignored for this target
/tmp/ccx4LEUS.s:12: Error: bad register name `%rsp'
/tmp/ccx4LEUS.s:13: Warning: .seh_stackalloc ignored for this target
/tmp/ccx4LEUS.s:17: Error: bad register name `%rsp'
/tmp/ccx4LEUS.s:18: Error: bad register name `%rbp'
/tmp/ccx4LEUS.s:20: Warning: zero assumed for missing expression
/tmp/ccx4LEUS.s:20: Warning: zero assumed for missing expression
configure:3940: $? = 1
configure:3978: result: no
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "musrfit"
| #define PACKAGE_TARNAME "musrfit"
| #define PACKAGE_VERSION "0.11.0"
| #define PACKAGE_STRING "musrfit 0.11.0"
| #define PACKAGE_BUGREPORT "andreas.suter@psi.ch"
| #define PACKAGE_URL ""
| #define PACKAGE "musrfit"
| #define VERSION "0.11.0"
| /* end confdefs.h.  */
|
| int
| main ()
| {
|
|   ;
|   return 0;
| }
configure:3983: error: in `/home/Philman/musrfit':
configure:3985: error: C compiler cannot create executables
See `config.log' for more details

## ---------------- ##
## Cache variables. ##
## ---------------- ##

ac_cv_build=x86_64-unknown-cygwin
ac_cv_env_BOOST_CFLAGS_set=
ac_cv_env_BOOST_CFLAGS_value=
ac_cv_env_BOOST_LIBS_set=
ac_cv_env_BOOST_LIBS_value=
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CUBA_CFLAGS_set=
ac_cv_env_CUBA_CFLAGS_value=
ac_cv_env_CUBA_LIBS_set=
ac_cv_env_CUBA_LIBS_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_FFTW3_CFLAGS_set=
ac_cv_env_FFTW3_CFLAGS_value=
ac_cv_env_FFTW3_LIBS_set=
ac_cv_env_FFTW3_LIBS_value=
ac_cv_env_GSL_CFLAGS_set=
ac_cv_env_GSL_CFLAGS_value=
ac_cv_env_GSL_LIBS_set=
ac_cv_env_GSL_LIBS_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_LIBXML2_CFLAGS_set=
ac_cv_env_LIBXML2_CFLAGS_value=
ac_cv_env_LIBXML2_LIBS_set=
ac_cv_env_LIBXML2_LIBS_value=
ac_cv_env_NEXUS_CFLAGS_set=
ac_cv_env_NEXUS_CFLAGS_value=
ac_cv_env_NEXUS_LIBS_set=
ac_cv_env_NEXUS_LIBS_value=
ac_cv_env_PKG_CONFIG_LIBDIR_set=
ac_cv_env_PKG_CONFIG_LIBDIR_value=
ac_cv_env_PKG_CONFIG_PATH_set=
ac_cv_env_PKG_CONFIG_PATH_value=
ac_cv_env_PKG_CONFIG_set=
ac_cv_env_PKG_CONFIG_value=
ac_cv_env_QT3MT_CFLAGS_set=
ac_cv_env_QT3MT_CFLAGS_value=
ac_cv_env_QT3MT_LIBS_set=
ac_cv_env_QT3MT_LIBS_value=
ac_cv_env_QT3_CFLAGS_set=
ac_cv_env_QT3_CFLAGS_value=
ac_cv_env_QT3_LIBS_set=
ac_cv_env_QT3_LIBS_value=
ac_cv_env_QT4_CFLAGS_set=
ac_cv_env_QT4_CFLAGS_value=
ac_cv_env_QT4_LIBS_set=
ac_cv_env_QT4_LIBS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_host=x86_64-unknown-cygwin
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/usr/bin/mkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_make_make_set=yes
am_cv_make_support_nested_variables=yes

## ----------------- ##
## Output variables. ##
## ----------------- ##

ACLOCAL='${SHELL} /home/Philman/musrfit/admin/missing aclocal-1.14'
ALLOCA=''
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY='1'
AM_V='$(V)'
AR=''
AUTOCONF='${SHELL} /home/Philman/musrfit/admin/missing autoconf'
AUTOHEADER='${SHELL} /home/Philman/musrfit/admin/missing autoheader'
AUTOMAKE='${SHELL} /home/Philman/musrfit/admin/missing automake-1.14'
AWK='gawk'
BMWTOOLS_CFLAGS=''
BMWTOOLS_LIBS=''
BOOST_CFLAGS=''
BOOST_INCLUDE=''
BOOST_LIBS=''
BUILD_ASLIBS_FALSE=''
BUILD_ASLIBS_TRUE=''
BUILD_BMWLIBS_FALSE=''
BUILD_BMWLIBS_TRUE=''
BUILD_CUBALIB_FALSE=''
BUILD_CUBALIB_TRUE=''
BUILD_MUSREDIT_FALSE=''
BUILD_MUSREDIT_TRUE=''
BUILD_MUSRGUI_FALSE=''
BUILD_MUSRGUI_TRUE=''
CC='gcc'
CCDEPMODE=''
CFLAGS=''
CPP=''
CPPFLAGS=''
CUBA_API_VERSION='3.2'
CUBA_CFLAGS=''
CUBA_LIBRARY_NAME='cuba'
CUBA_LIBRARY_VERSION='3:2:0'
CUBA_LIBS=''
CUBA_PREFIX=''
CUBA_RELEASE='3.2'
CUBA_VERSION='3.2.0'
CXX=''
CXXCPP=''
CXXDEPMODE=''
CXXFLAGS=''
CYGPATH_W='cygpath -w'
DEFS=''
DEPDIR='.deps'
DLLTOOL=''
DOCDIR=''
DSYMUTIL=''
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP=''
EXEEXT=''
FFTW3_CFLAGS=''
FFTW3_LIBS=''
FFTW3_PREFIX=''
FGREP=''
FITPOFB_CFLAGS=''
FITPOFB_LIBS=''
GREP=''
GSL_CFLAGS=''
GSL_LIBS=''
GSL_PREFIX=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
IS_CYGWIN_FALSE=''
IS_CYGWIN_TRUE=''
IS_DARWIN_FALSE=''
IS_DARWIN_TRUE=''
LD=''
LDFLAGS=''
LEM_API_VERSION='1.5'
LEM_CFLAGS=''
LEM_LIBRARY_NAME='TLemRunHeader'
LEM_LIBRARY_VERSION='1:5:0'
LEM_LIBS=''
LEM_RELEASE='1.5'
LEM_VERSION='1.5.0'
LIBOBJS=''
LIBS=''
LIBTOOL=''
LIBXML2_CFLAGS=''
LIBXML2_LIBS=''
LIBXML2_PREFIX=''
LIPO=''
LN_S='ln -s'
LOCAL_BIN_CXXFLAGS=''
LOCAL_BIN_LDFLAGS=''
LOCAL_CUBA_LIB_CFLAGS=''
LOCAL_LIB_CXXFLAGS=''
LOCAL_LIB_LDFLAGS=''
LOCAL_MUD_LIB_CFLAGS=''
LOCAL_PNEXUS_LIB_CXXFLAGS=''
LOCAL_PSIBIN_LIB_CXXFLAGS=''
LTLIBOBJS=''
MAKEINFO='${SHELL} /home/Philman/musrfit/admin/missing makeinfo'
MANIFEST_TOOL=''
MKDIR_P='/usr/bin/mkdir -p'
MUD_API_VERSION='0.0'
MUD_CFLAGS=''
MUD_LIBRARY_NAME='mud'
MUD_LIBRARY_VERSION='0:0:0'
MUD_LIBS=''
MUD_RELEASE='0.0'
MUD_VERSION='0.0.0'
MUSR_API_VERSION='0.11'
MUSR_LIBRARY_NAME='PMusr'
MUSR_LIBRARY_VERSION='0:11:0'
MUSR_RELEASE='0.11'
MUSR_ROOT_API_VERSION='1.0'
MUSR_ROOT_CFLAGS=''
MUSR_ROOT_LIBRARY_NAME='TMusrRunHeader'
MUSR_ROOT_LIBRARY_VERSION='1:0:0'
MUSR_ROOT_LIBS=''
MUSR_ROOT_RELEASE='1.0'
MUSR_ROOT_VERSION='1.0.0'
MUSR_VERSION='0.11.0'
NEXUS_CFLAGS=''
NEXUS_LIBS=''
NEXUS_PREFIX=''
NM=''
NMEDIT=''
OBJDUMP=''
OBJEXT=''
OTOOL64=''
OTOOL=''
PACKAGE='musrfit'
PACKAGE_BUGREPORT='andreas.suter@psi.ch'
PACKAGE_NAME='musrfit'
PACKAGE_STRING='musrfit 0.11.0'
PACKAGE_TARNAME='musrfit'
PACKAGE_URL=''
PACKAGE_VERSION='0.11.0'
PATH_SEPARATOR=':'
PKG_CONFIG=''
PKG_CONFIG_LIBDIR=''
PKG_CONFIG_PATH=''
PLUGIN_API_VERSION='1.0'
PLUGIN_LIBRARY_VERSION='1:0:0'
PLUGIN_MAJOR_VERSION='1'
PLUGIN_MINOR_VERSION='0'
PLUGIN_RELEASE='1.0'
PLUGIN_VERSION='1.0.0'
PMUSR_CFLAGS=''
PMUSR_LIBS=''
PNEXUS_API_VERSION='0.9'
PNEXUS_CXXFLAGS=''
PNEXUS_ENABLED_FALSE=''
PNEXUS_ENABLED_TRUE=''
PNEXUS_LIBRARY_NAME='PNeXus'
PNEXUS_LIBRARY_VERSION='0:9:0'
PNEXUS_LIBS=''
PNEXUS_RELEASE='0.9'
PNEXUS_VERSION='0.9.0'
PSIBIN_API_VERSION='0.1'
PSIBIN_CFLAGS=''
PSIBIN_LIBRARY_NAME='Class_MuSR_PSI'
PSIBIN_LIBRARY_VERSION='0:1:0'
PSIBIN_LIBS=''
PSIBIN_RELEASE='0.1'
PSIBIN_VERSION='0.1.0'
QT3MT_CFLAGS=''
QT3MT_LIBS=''
QT3_CFLAGS=''
QT3_LIBS=''
QT4_CFLAGS=''
QT4_LIBS=''
RANLIB=''
ROOTAUXCFLAGS=''
ROOTAUXLIBS=''
ROOTCFLAGS=''
ROOTCINT=''
ROOTCONF=''
ROOTETCDIR=''
ROOTEXEC=''
ROOTGLIBS=''
ROOTINCDIR=''
ROOTLIBDIR=''
ROOTLIBS=''
ROOTRPATH=''
ROOTSOVERSION=''
ROOTVERSION=''
ROOT_CFLAGS=''
ROOT_LIBS=''
SED=''
SET_MAKE=''
SHELL='/bin/sh'
STRIP=''
USERFCN_LIBRARY_NAME='PUserFcnBase'
USERFCN_LIBS=''
VERSION='0.11.0'
ac_ct_AR=''
ac_ct_CC='gcc'
ac_ct_CXX=''
ac_ct_DUMPBIN=''
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE=''
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE=''
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep='_no'
am__quote=''
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
bindir='${exec_prefix}/bin'
build='x86_64-unknown-cygwin'
build_alias=''
build_cpu='x86_64'
build_os='cygwin'
build_vendor='unknown'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='x86_64-unknown-cygwin'
host_alias=''
host_cpu='x86_64'
host_os='cygwin'
host_vendor='unknown'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /home/Philman/musrfit/admin/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='NONE'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''

## ----------- ##
## confdefs.h. ##
## ----------- ##

/* confdefs.h */
#define PACKAGE_NAME "musrfit"
#define PACKAGE_TARNAME "musrfit"
#define PACKAGE_VERSION "0.11.0"
#define PACKAGE_STRING "musrfit 0.11.0"
#define PACKAGE_BUGREPORT "andreas.suter@psi.ch"
#define PACKAGE_URL ""
#define PACKAGE "musrfit"
#define VERSION "0.11.0"

configure: exit 77

Please help me fixing this.
Thanks in advance,

Philipp

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