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Well, it definitely doesn't work for me. I don't think I have in any way non-standard Cygwin installation.
It would be helpful if you could download the -src package of Boost using setup.exe, extract it and run the build-boost.sh script. Don't forget to remove the --without-test line or make it into --with-test.
Extracting source...tar: unrecognized option `--overwrite-dir' Try `tar --help' or `tar --usage' for more information.
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