Problems with setup.exe

[Tom Weichmann]

	I know that setup.exe is a work in progress, and have heard 
that some major re-construction is under way, but I would like to 
know if there is a fix for this.  Every time I update a package using 
setup -u foo setup reverts my mount table back to the default, and 
re-writes cygwin.bat deleting any modifications I have made.

Thank you,

Tom Weichmann

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