R does not handle package non-ASCII DESCRIPTION files properly

Brian Inglis Brian.Inglis@SystematicSw.ab.ca
Tue May 5 14:55:14 GMT 2020


On 2020-05-05 02:47, Markus Hoenicka wrote:
> Am 2020-04-30 22:17, schrieb Marco Atzeri via Cygwin:
>> Am 30.04.2020 um 17:28 schrieb Markus Hoenicka:
>>> I've contacted the processx package maintainer on a problem reported here
>>> previously (see https://cygwin.com/pipermail/cygwin/2020-April/244667.html).
>>> He suggested to try the github version but that triggered a different type of
>>> error which does not seem to be package-specific.
>>>
>>> 1st try: build from a local copy of the github package sources with default
>>> locale settings on a German Windows 10 system
>>>
>>>> install.packages("/cygdrive/c/Temp/processx-master",repos=NULL,type="source")

>>> Installing package into ‘/usr/lib/R/site-library’
>>> (as ‘lib’ is unspecified)
>>> * installing *source* package ‘processx’ ...
>>> ** using staged installation
>>> Error : Invalid DESCRIPTION file
>>>
>>> Authors@R field gives no person with maintainer role, valid email
>>> address and non-empty name.
>>>
>>> See section 'The DESCRIPTION file' in the 'Writing R Extensions'
>>> manual.
>>>
>>> ERROR: installing package DESCRIPTION failed for package ‘processx’
>>> * removing ‘/usr/lib/R/site-library/processx’
>>> Warning message:
>>> In install.packages("/cygdrive/c/Temp/processx-master", repos = NULL,  :
>>>    installation of package ‘/cygdrive/c/Temp/processx-master’ had non-zero
>>> exit status

>> Noted. I will look on both the two issues but it could take a bit.
>> I never looked at the build process of R packages in such details

> kind of "while you're at it": I've noticed one additional problem with non-ASCII
> characters. This may or may not be related to the problem reported above.
> Several packages throw an error during installation, in my case questionr,
> readr, pls, and vegan. The output of the latter is shown here:
> 
> installing to /usr/lib/R/site-library/00LOCK-vegan/00new/vegan/libs
> ** R
> ** data
> ** inst
> ** byte-compile and prepare package for lazy loading
> ** help
> *** installing help indices
> Error in Rd_info(db[[i]]) :
>   missing/empty \title field in
> '/tmp/RtmprL23H1/R.INSTALLffe51949f2e2/vegan/man/sipoo.Rd'
> Rd files must have a non-empty \title.
> See chapter 'Writing R documentation' in manual 'Writing R Extensions'.
> * removing ‘/usr/lib/R/site-library/vegan’
> 
> The file in question (man/sipoo.Rd) starts like this:
> 
> \encoding{UTF-8}
> \name{sipoo}
> \alias{sipoo}
> \alias{sipoo.map}
> \docType{data}
> \title{ Birds in the Archipelago of Sipoo (Sibbo and Borgå)}
> 
> Please note that the encoding is set to UTF-8 explicitely. Nonetheless, the a
> with overring in "Borgå" seems to mess up the title, which makes R think the
> \title field is missing. Changing the å to a circumvents this problem. I've also
> noticed that non-ASCII characters outside the title field do not hurt at all.

Add "Encoding: UTF-8" to the package DESCRIPTION file and remove from .Rd files,
as documented near the bottom of the section:

https://cran.r-project.org/doc/manuals/R-exts.html#The-DESCRIPTION-file

referenced by:

https://stackoverflow.com/questions/18080303/rd-files-with-different-encoding

-- 
Take care. Thanks, Brian Inglis, Calgary, Alberta, Canada

This email may be disturbing to some readers as it contains
too much technical detail. Reader discretion is advised.


More information about the Cygwin mailing list